Consolidate workflows and tools from commands repository

Repository Restructure:
- Move all 83 agent .md files to agents/ subdirectory
- Add 15 workflow orchestrators from commands repo to workflows/
- Add 42 development tools from commands repo to tools/
- Update README for unified repository structure

The commands repository functionality is now fully integrated, providing
complete workflow orchestration and development tooling alongside agents.

Directory Structure:
- agents/    - 83 specialized AI agents
- workflows/ - 15 multi-agent orchestration commands
- tools/     - 42 focused development utilities

No breaking changes to agent functionality - all agents remain accessible
with same names and behavior. Adds workflow and tool commands for enhanced
multi-agent coordination capabilities.

workflows/smart-fix.md

@@ -0,0 +1,48 @@
+---
+model: claude-opus-4-1
+---
+
+Intelligently fix the issue using automatic agent selection with explicit Task tool invocations:
+
+[Extended thinking: This workflow analyzes the issue and automatically routes to the most appropriate specialist agent(s). Complex issues may require multiple agents working together.]
+
+First, analyze the issue to categorize it, then use Task tool with the appropriate agent:
+
+## Analysis Phase
+Examine the issue: "$ARGUMENTS" to determine the problem domain.
+
+## Agent Selection and Execution
+
+### For Deployment/Infrastructure Issues
+If the issue involves deployment failures, infrastructure problems, or DevOps concerns:
+- Use Task tool with subagent_type="devops-troubleshooter"
+- Prompt: "Debug and fix this deployment/infrastructure issue: $ARGUMENTS"
+
+### For Code Errors and Bugs
+If the issue involves application errors, exceptions, or functional bugs:
+- Use Task tool with subagent_type="debugger"
+- Prompt: "Analyze and fix this code error: $ARGUMENTS. Provide root cause analysis and solution."
+
+### For Database Performance
+If the issue involves slow queries, database bottlenecks, or data access patterns:
+- Use Task tool with subagent_type="database-optimizer"
+- Prompt: "Optimize database performance for: $ARGUMENTS. Include query analysis, indexing strategies, and schema improvements."
+
+### For Application Performance
+If the issue involves slow response times, high resource usage, or performance degradation:
+- Use Task tool with subagent_type="performance-engineer"
+- Prompt: "Profile and optimize application performance issue: $ARGUMENTS. Identify bottlenecks and provide optimization strategies."
+
+### For Legacy Code Issues
+If the issue involves outdated code, deprecated patterns, or technical debt:
+- Use Task tool with subagent_type="legacy-modernizer"
+- Prompt: "Modernize and fix legacy code issue: $ARGUMENTS. Provide migration path and updated implementation."
+
+## Multi-Domain Coordination
+For complex issues spanning multiple domains:
+1. Use primary agent based on main symptom
+2. Use secondary agents for related aspects
+3. Coordinate fixes across all affected areas
+4. Verify integration between different fixes
+
+Issue: $ARGUMENTS